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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36264484_36266535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36264484 - 36266535

Intron Length:

2052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CACTGGTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CTGTGTTTCACT

Flanking Amino Acid:

EEGVKDRKEMMSCKLLFPIT

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

69.6

41.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

73.1

0.52

68.5

41.8

Minor 5ss

35.5

-1.7

3.4

47.8

42.4

Minor BPS

49.3

0.03

2.2

70.68

46.8

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625