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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36285614_36286144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36285614 - 36286144

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGAAA

5'SS Class:

major

3'SS Sequence:

AATTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTAAAATTAATT

Flanking Amino Acid:

RMMTALWERQDRIYPELQKF

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

34.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.6

0.71

0.8

74.3

40.5

Minor 5ss

27.9

-2.5

2.8

31.2

42.5

Minor BPS

56.2

0.27

1.8

76.4

39.5

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625