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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36298701_36300206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36298701 - 36300206

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAATG

5'SS Class:

major

3'SS Sequence:

TTTAATCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

EHTILHLPEQARGEINPLEE

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

66.4

45.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.8

81.6

35.6

Minor 5ss

41.2

-1

3.3

57.1

47.2

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625