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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36317831_36318817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36317831 - 36318817

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

GTGGTCTAAATT

Flanking Amino Acid:

VQYKQFTAWLWVRDMLTDVI

Intron Amino Acid Position:

939

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

69.1

0.48

32.1

Major PPT

82.5

0.73

0.9

76.8

37.3

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

51.6

0.13

1.8

67.42

44.2

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625

ENSAPLT00000038083

36238775 - 36350860

112086