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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36325378_36328454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36325378 - 36328454

Intron Length:

3077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATATATAATG

Flanking Amino Acid:

ECCFDSSLEYNTGCILGVGL

Intron Amino Acid Position:

1138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

0.72

78.4

31.2

Major PPT

75.1

0.56

78.8

27.2

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

48.6

-0.2

1.8

56.69

38.7

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625