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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36337179_36338311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36337179 - 36338311

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGTGACTGAATA

Flanking Amino Acid:

IDFAIESGKKGPESVPAQLL

Intron Amino Acid Position:

1380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

74.5

0.61

79.6

29.1

Major PPT

85.8

0.81

0.9

80.9

36.4

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

53.2

0.1

1.7

66.19

40.1

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625