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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36344117_36345203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36344117 - 36345203

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGATG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATGTTTTAATT

Flanking Amino Acid:

EIDRIVQISKNNIEKAIFTK

Intron Amino Acid Position:

1579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.3

40.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.8

0.69

0.9

74.3

39.9

Minor 5ss

35.9

-1.6

3.2

48.4

47.4

Minor BPS

69.2

0.68

1.3

36.6

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625