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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36349261_36350786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36349261 - 36350786

Intron Length:

1526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

CTTGTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

CTTGTCTTCACA

Flanking Amino Acid:

LSKSSTDLLKATLLALRSLA

Intron Amino Acid Position:

1780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

70.2

0.5

72.1

Major PPT

81.3

0.71

0.8

75.7

32.9

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

57.6

0.23

1.9

70.02

42.9

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003744

36238236 - 36350860

112625

ENSAPLT00000038083

36238775 - 36350860

112086