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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36357304_36358116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36357304 - 36358116

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATGTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTTGGCTAAAGA

Flanking Amino Acid:

LLYPLSVLAKAFAIYVSLPY

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

79.3

0.66

72.4

42.2

Minor 5ss

26.2

-2.7

2.9

30.9

42.7

Minor BPS

46.8

-0.2

2.4

66.36

46.4

Associated Gene:

Gene:

HACD4

Ensembl Gene ID:

ENSAPLG00000003531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003611

36356382 - 36369918

13537