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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36405290_36405989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36405290 - 36405989

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

AAATTATAAACT

Flanking Amino Acid:

VTILAQSKYEVYRDIMACGR

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

78.6

0.71

78.6

Major PPT

79.9

0.67

0.9

76.7

37.4

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

50.3

0.09

1.9

69.52

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034655

36395213 - 36439216

44004

ENSAPLT00000027133

36395213 - 36459932

64720

ENSAPLT00000002402

36395213 - 36441239

46027