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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36409886_36410911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36409886 - 36410911

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAATAT

U12 Branch Point Sequence:

TGTTTTGTTACT

Flanking Amino Acid:

SLNDSDSEMDDISEIESNRS

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

58.7

0.22

1.1

55.4

Major PPT

78.3

0.64

0.8

72.7

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

49.1

0.01

2.3

75.76

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027133

36395213 - 36459932

64720

ENSAPLT00000002402

36395213 - 36441239

46027

ENSAPLT00000034655

36395213 - 36439216

44004