Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36411325_36412798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36411325 - 36412798

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTACA

5'SS Class:

major

3'SS Sequence:

TCCCTGATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

ATTTCCCTGATT

Flanking Amino Acid:

VLLTKGKHNEEYGLRLGSQI

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.2

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

70.5

0.46

0.9

61.9

38.7

Minor 5ss

34.2

-1.8

2.9

34.5

41.3

Minor BPS

69.2

0.69

1.6

86.39

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034655

36395213 - 36439216

44004

ENSAPLT00000027133

36395213 - 36459932

64720

ENSAPLT00000002402

36395213 - 36441239

46027