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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36450767_36459227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36450767 - 36459227

Intron Length:

8461

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

GGAATAATAATG

Flanking Amino Acid:

PLHRGDLREQLRKLFIRKEV

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.9

84.2

29.8

Major BPS

0.75

78.6

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

20.3

-3.4

3.3

27.6

36.2

Minor BPS

41.3

-0.8

1.8

40.87

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027133

36395213 - 36459932

64720