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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36521269_36525672_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
36521269 - 36525672

Intron Length:
4404

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGAGCT

5'SS Class:
strong_major

3'SS Sequence:
TTATTTCTTCCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
CTTTTTTTATTT

Flanking Amino Acid:
LFGIKPDDYLYSICSEPLIE

Intron Amino Acid Position:
123

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.8
0.9
74.3
34.1

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
88.7
0.87
0.7
81.4
36

Minor 5ss
33.2
-1.9
3.4
45.7
43.4

Minor BPS
63.5
0.5
1.6
78.46
39

Associated Gene:

Gene:
PIP5K1B

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36478171 - 36588034
109864

36478171 - 36553651
75481