Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36537614_36552930_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36537614 - 36552930

Intron Length:

15317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GATGCTTGAATT

Flanking Amino Acid:

KPNEEKTYKKTASSAIKGAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

79.2

0.66

0.9

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

57.3

0.31

1.5

70.66

40.5

Associated Gene:

Gene:

PIP5K1B

Ensembl Gene ID:

ENSAPLG00000016263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040542

36478171 - 36588034

109864

ENSAPLT00000016984

36478171 - 36553651

75481