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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36633733_36634481_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
36633733 - 36634481

Intron Length:
749

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGGGGC

5'SS Class:
major

3'SS Sequence:
AAAATTTTTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAA

U12 Branch Point Sequence:
TTTTCTAAAATT

Flanking Amino Acid:
RGSRQLGVPTANFSDQVVES

Intron Amino Acid Position:
44

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1
58.8
40.6

Major BPS
85.3
0.88
0.8
84.2
21.8

Major PPT
73.3
0.52
1
66.3
44

Minor 5ss
24.6
-2.9
3.4
32.5
42.6

Minor BPS
60.6
0.41
1.9
84.42
36.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36633603 - 36636129
2527

36633603 - 36636761
3159