Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_3664560_3664796_R

Intron Information:

Intron Rank:

150549

Intron Class:

major

Intron Phase:

Intron Coordinates:

3664560 - 3664796

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028585

3663860 - 3665640

1781