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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36686641_36689844_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36686641 - 36689844

Intron Length:

3204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCTCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTGCCTCAAAA

Flanking Amino Acid:

PNNCISCPSTRFFDDGRCVI

Intron Amino Acid Position:

945

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

81.4

30.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

57.1

0.16

1.1

57.3

37.8

Minor 5ss

43.3

-0.7

3.1

60.6

44.5

Minor BPS

58.1

0.25

1.8

70.08

41.7

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015651

36684319 - 36904096

219778