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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36689948_36702903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36689948 - 36702903

Intron Length:

12956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGCACA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTTTTTCTACCA

Flanking Amino Acid:

KVLQQLCCRTYEYLDEFQEC

Intron Amino Acid Position:

911

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.2

64.7

41.1

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

87.4

0.84

0.8

82.4

Minor 5ss

-1

3.1

53.9

43.3

Minor BPS

55.9

0.18

1.9

75.11

36.7

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778