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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36703003_36704478_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36703003 - 36704478

Intron Length:

1476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTCCGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTCAA

U12 Branch Point Sequence:

TTCCCCTTCTTC

Flanking Amino Acid:

VCVVGTVCKDATEESWAEGG

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.9

31.3

Major BPS

65.8

0.39

1.1

69.2

36.3

Major PPT

54.6

0.1

1.1

56.3

33.9

Minor 5ss

27.7

-2.6

29.3

Minor BPS

41.2

-0.6

3.5

63.26

42.8

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778