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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36706515_36709113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36706515 - 36709113

Intron Length:

2599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTACAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTTTTTACAATA

Flanking Amino Acid:

QICTECKHGLSLHGTKCAIR

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

74.2

0.54

0.9

71.2

33.1

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

48.8

-0.1

1.8

63.52

37.5

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778