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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36710892_36711450_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36710892 - 36711450

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TCATTAACGACT

Flanking Amino Acid:

HYYYKSKNNTRICVSTCPPG

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.6

40.2

Major BPS

79.4

0.73

80.1

Major PPT

75.4

0.57

0.9

68.9

37.1

Minor 5ss

32.7

-2

3.1

41.7

44.2

Minor BPS

-0.4

61.97

41.7

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015651

36684319 - 36904096

219778

ENSAPLT00000028013

36688332 - 36904096

215765