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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36747003_36760091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36747003 - 36760091

Intron Length:

13089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TAATCTGTGACT

Flanking Amino Acid:

AGIIALALEANPFLTWRDIQ

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

30.6

Major BPS

85.7

0.89

0.8

22.2

Major PPT

82.4

0.73

0.7

75.9

32.7

Minor 5ss

42.3

-0.9

3.1

58.2

40.1

Minor BPS

56.8

0.29

76.46

40.3

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778