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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36760193_36772844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36760193 - 36772844

Intron Length:

12652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTATGTCTT

5'SS Class:

major

3'SS Sequence:

CAATTTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATGTTCTAAATT

Flanking Amino Acid:

SSGESYDRKIITTDLRQRCT

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

69.9

40.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.6

0.64

0.9

69.7

Minor 5ss

48.1

-0.2

2.8

36.5

Minor BPS

63.6

0.51

1.6

77.35

39.9

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778