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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36797125_36802182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36797125 - 36802182

Intron Length:

5058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTGTTTCATCC

Flanking Amino Acid:

VGIAFNAKIGGVRMLDGDVT

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

72.1

0.5

72.5

32.3

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

46.5

-0.2

1.8

58.39

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778