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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36802272_36827821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36802272 - 36827821

Intron Length:

25550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

TGTCTGACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

CTTACTTGAAAA

Flanking Amino Acid:

MPRYDASNENKHGTRCAGEV

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

66.8

38.9

Major BPS

0.1

59.7

32.6

Major PPT

68.8

0.42

0.9

59.6

41.6

Minor 5ss

32.8

-2

3.3

42.1

Minor BPS

55.2

0.16

1.6

66.31

39.8

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778