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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36827899_36830113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36827899 - 36830113

Intron Length:

2215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CTGGTTTTATTT

Flanking Amino Acid:

RNHPDLMQNYDSQASFDVNG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

83.4

Major BPS

0.82

0.8

24.9

Major PPT

71.9

0.49

64.6

41.5

Minor 5ss

35.6

-1.6

3.5

53.7

43.8

Minor BPS

48.4

-0

1.7

61.91

43.6

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778