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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36830258_36857280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36830258 - 36857280

Intron Length:

27023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACATTTTTATCT

Flanking Amino Acid:

DPKWPSMWYMHCSDNTHHCQ

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.3

0.71

0.7

26.2

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

0.33

1.6

70.23

41.2

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778