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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36852_37342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36852 - 37342

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CGTGGCGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GTCCTCTCATCG

Flanking Amino Acid:

LSSMGMRPLNANHLSPQALK

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

66.2

0.36

57.4

43.2

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

45.5

-0.4

1.8

49.46

44.2

Associated Gene:

Gene:

RUSC2

Ensembl Gene ID:

ENSAPLG00000023823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038355

26121 - 58339

32219

ENSAPLT00000007727

26121 - 58339

32219