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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36857395_36877261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36857395 - 36877261

Intron Length:

19867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAA

U12 Branch Point Sequence:

TAACACTTACCA

Flanking Amino Acid:

THSFISMEPKVEWIQQQVVK

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

56.4

0.16

1.3

67.1

39.2

Major PPT

68.6

0.42

1.1

64.2

41.5

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

52.3

0.07

1.8

64.49

40.9

Associated Gene:

Gene:

PCSK5

Ensembl Gene ID:

ENSAPLG00000014928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028013

36688332 - 36904096

215765

ENSAPLT00000015651

36684319 - 36904096

219778