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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37107240_37107718_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37107240 - 37107718

Intron Length:
479

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAAGATC

5'SS Class:
major

3'SS Sequence:
TTGTGTTATAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GATTAAT

U12 Branch Point Sequence:
CAGTGATTAATA

Flanking Amino Acid:
ADIVEMLLAKGARTDLKNNE

Intron Amino Acid Position:
120

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.1
0.55
1.1
70.2
40.3

Major BPS
74
0.6
1.2
75.9
36.3

Major PPT
66.8
0.38
1.2
67.6
42.1

Minor 5ss
35.7
-1.6
3.3
43.2
44.4

Minor BPS
48.1
-0.1
2
57.25
42.5

Associated Gene:

Gene:
OSTF1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37103290 - 37112877
9588

37103290 - 37112657
9368