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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37202045_37203425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37202045 - 37203425

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CTGTTTGTAACT

Flanking Amino Acid:

KYLSLQKIHARMGQGVPIVG

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.1

0.45

1.1

66.4

43.3

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

55.4

0.25

74.34

43.4

Associated Gene:

Gene:

TRPM6

Ensembl Gene ID:

ENSAPLG00000014165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014750

37199336 - 37264972

65637

ENSAPLT00000047053

37199911 - 37209297

9387

ENSAPLT00000026911

37195742 - 37237971

42230

ENSAPLT00000019720

37198979 - 37237971

38993

ENSAPLT00000018135

37198689 - 37237971

39283