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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37220930_37223379_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37220930 - 37223379

Intron Length:

2450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACCATGG

5'SS Class:

weak_major

3'SS Sequence:

AGTCTGATGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGACTCAGAAGT

Flanking Amino Acid:

PQSQDFHQFTCQVDGGQRNL

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

47.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

49.7

-0

1.2

42.6

Minor 5ss

-0.9

3.2

53.5

45.5

Minor BPS

43.8

-0.3

1.9

61.08

41.8

Associated Gene:

Gene:

TRPM6

Ensembl Gene ID:

ENSAPLG00000014165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026911

37195742 - 37237971

42230

ENSAPLT00000019720

37198979 - 37237971

38993

ENSAPLT00000018135

37198689 - 37237971

39283