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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37224542_37226688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37224542 - 37226688

Intron Length:

2147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

ACATTCTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTGTTTGATT

Flanking Amino Acid:

FSTAIEKVREVFISEPGKFS

Intron Amino Acid Position:

822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

73.3

0.52

70.5

39.5

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

67.2

0.62

1.7

86.34

34.1

Associated Gene:

Gene:

TRPM6

Ensembl Gene ID:

ENSAPLG00000014165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019720

37198979 - 37237971

38993

ENSAPLT00000018135

37198689 - 37237971

39283

ENSAPLT00000014750

37199336 - 37264972

65637

ENSAPLT00000026911

37195742 - 37237971

42230