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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37226945_37227867_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37226945 - 37227867

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCATTACAC

5'SS Class:

weak_major

3'SS Sequence:

CATGTCCAGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATAATTAACA

Flanking Amino Acid:

PYLTMIGKMVTNMFYIVVMM

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.3

44.2

Major BPS

0.72

78.4

31.2

Major PPT

59.8

0.22

1.1

54.4

40.3

Minor 5ss

29.8

-2.3

42.1

Minor BPS

61.9

0.37

1.8

73.63

Associated Gene:

Gene:

TRPM6

Ensembl Gene ID:

ENSAPLG00000014165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026911

37195742 - 37237971

42230

ENSAPLT00000019720

37198979 - 37237971

38993

ENSAPLT00000018135

37198689 - 37237971

39283