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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37237293_37237331_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37237293 - 37237331

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACAGGGA

5'SS Class:

weak_major

3'SS Sequence:

AACTGCAAAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TATTCAATGATG

Flanking Amino Acid:

LNLSFSSTPTNIAVQQNMQS

Intron Amino Acid Position:

1301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.1

51.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

42.3

-0.4

1.7

38.1

Minor 5ss

28.6

-2.5

3.7

37.1

45.5

Minor BPS

49.2

-0.2

61.84

39.9

Associated Gene:

Gene:

TRPM6

Ensembl Gene ID:

ENSAPLG00000014165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014750

37199336 - 37264972

65637