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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37237884_37239640_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37237884 - 37239640

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTACCTCTA

5'SS Class:

weak_major

3'SS Sequence:

CCTATAAATCGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

CATCCTATAAAT

Flanking Amino Acid:

CKARGGNKNMLVVLSVSCQV

Intron Amino Acid Position:

1485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.7

0.04

1.3

53.3

45.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

47.5

-0.1

1.7

48.1

43.1

Minor 5ss

45.2

-0.5

3.1

67.8

43.1

Minor BPS

50.9

0.11

1.7

69.09

41.2

Associated Gene:

Gene:

TRPM6

Ensembl Gene ID:

ENSAPLG00000014165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014750

37199336 - 37264972

65637