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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37294461_37294960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37294461 - 37294960

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

TAATGTCTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTCTTATTT

Flanking Amino Acid:

NHLDDETLTKLIAKIPTITA

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.2

0.5

65.2

40.7

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

68.9

0.67

1.5

82.89

39.2

Associated Gene:

Gene:

RORB

Ensembl Gene ID:

ENSAPLG00000007187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028348

37294305 - 37357633

63329

ENSAPLT00000007451

37294305 - 37353939

59635