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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_3738854_3742050_R

Intron Information:

Intron Rank:

151362

Intron Class:

major

Intron Phase:

Intron Coordinates:

3738854 - 3742050

Intron Length:

3197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGGCAT

U12 Branch Point Sequence:

TCTGGCCCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

45.9

-0.2

1.4

52.7

43.2

Major PPT

89.3

0.88

0.6

87.5

22.7

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

37.5

-0.8

2.3

56.17

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020465

3738626 - 3830138

91513