Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37519764_37527005_F

Intron Information:

Intron Rank:

137787

Intron Class:

major

Intron Phase:

Intron Coordinates:

37519764 - 37527005

Intron Length:

7242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

GTTTACTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTGTTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

77.9

36.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

71.3

0.48

1.1

68.3

42.2

Minor 5ss

44.1

-0.6

2.9

40.8

Minor BPS

60.1

0.39

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032463

37507518 - 37529114

21597