Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37987455_37988324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37987455 - 37988324

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTACATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

ATTATCCTAACA

Flanking Amino Acid:

YGISLRQAIMDELKGDYENI

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

34.9

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

70.1

0.45

40.2

Minor 5ss

44.9

-0.5

3.2

63.2

43.8

Minor BPS

62.8

0.4

1.7

75.27

35.4

Associated Gene:

Gene:

ANXA1

Ensembl Gene ID:

ENSAPLG00000007359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034219

37987398 - 38008030

20633

ENSAPLT00000025258

37987071 - 38008030

20960

ENSAPLT00000007737

37987398 - 38016586

29189