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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37990402_37991206_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37990402 - 37991206

Intron Length:
805

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGTGGT

5'SS Class:
strong_major

3'SS Sequence:
TGTTTCATTACAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
GTGACTTTATCT

Flanking Amino Acid:
GDIENCLTALVKCATSKPAF

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
77.9
36.8

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
83.8
0.76
0.8
77.5
35.6

Minor 5ss
34.5
-1.8
3.3
46.4
44.2

Minor BPS
58.9
0.36
1.7
73.3
43.6

Associated Gene:

Gene:
ANXA1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37987071 - 38008030
20960

37987398 - 38016586
29189

37987398 - 38008030
20633