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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_37995736_37996347_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37995736 - 37996347

Intron Length:
612

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTCAA

5'SS Class:
strong_major

3'SS Sequence:
TCATTTTTAACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTTTTTTTAAAT

Flanking Amino Acid:
DAEELRASMKGLGTDEDTLI

Intron Amino Acid Position:
124

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.9
0.82
0.9
77
33.6

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
80.1
0.68
0.9
76.9
35.9

Minor 5ss
35.2
-1.7
2.9
41.4
39.1

Minor BPS
79.5
1
1.2
92.62
29

Associated Gene:

Gene:
ANXA1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37987071 - 38008030
20960

37987398 - 38016586
29189

37987398 - 38008030
20633