Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38000594_38003064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38000594 - 38003064

Intron Length:

2471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CCTTCTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CCTTCTTCAACA

Flanking Amino Acid:

FMDNQEQECIKSSKGGHSVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.61

0.8

30.5

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

65.4

0.48

1.6

71.01

41.7

Associated Gene:

Gene:

ANXA1

Ensembl Gene ID:

ENSAPLG00000007359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034219

37987398 - 38008030

20633

ENSAPLT00000025258

37987071 - 38008030

20960

ENSAPLT00000007737

37987398 - 38016586

29189