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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38041482_38042167_F

Intron Information:

Intron Rank:

124476

Intron Class:

major

Intron Phase:

Intron Coordinates:

38041482 - 38042167

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

CTACTACCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTTTTTCTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

74.6

0.55

0.9

70.6

34.9

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

53.7

0.2

1.9

75.28

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044560

38040301 - 38054786

14486

ENSAPLT00000032001

38040301 - 38049576

9276

ENSAPLT00000026947

38041401 - 38047535

6135