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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38042261_38044666_F

Intron Information:

Intron Rank:

124477

Intron Class:

major

Intron Phase:

Intron Coordinates:

38042261 - 38044666

Intron Length:

2406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CTTGTCTCATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

48.2

-0.1

1.9

61.59

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026947

38041401 - 38047535

6135

ENSAPLT00000044560

38040301 - 38054786

14486

ENSAPLT00000032001

38040301 - 38049576

9276