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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38114934_38125296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38114934 - 38125296

Intron Length:

10363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTTCCTTTACA

Flanking Amino Acid:

LKDLKIKYTKIFINNEWHNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

36.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

92.9

0.96

0.6

87.9

22.2

Minor 5ss

33.8

-1.8

2.6

43.7

43.3

Minor BPS

83.6

1.05

1.4

91.85

28.4

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074