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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38125402_38130326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38125402 - 38130326

Intron Length:

4925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGTTT

5'SS Class:

major

3'SS Sequence:

TTTTCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATTTTATTT

Flanking Amino Acid:

KICEIEEGDKADVDKAVKAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

72.8

39.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

85.5

0.8

0.7

80.7

24.6

Minor 5ss

40.6

-1

3.8

63.6

48.1

Minor BPS

61.8

0.45

1.6

79.69

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074