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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38130468_38133092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38130468 - 38133092

Intron Length:

2625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

CTGTTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCATATTAACT

Flanking Amino Acid:

LVERDRLILATMEAIDGGKL

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.9

0.72

0.9

76.3

37.7

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

65.3

0.56

1.6

81.54

39.8

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074