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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38134344_38136290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38134344 - 38136290

Intron Length:

1947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

ATCTGTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTATTAGTAATA

Flanking Amino Acid:

PIGVCGQIIPWNFPLVMFIW

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

39.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.8

0.69

0.9

77.4

36.3

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

-0.2

2.2

61.67

38.5

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074